The 10 Best Accounting Apps for Shopify

The top 10 apps merchants see when they search the Shopify App Store for accounting, in the exact order the store ranks them. Only Shopify's organic ranking is shown, never sponsored ads.

Updated August 26, 2026 · Organic results only

Maintained by Rankbase, built by a Shopify app developer

1

QuickBooks Online

★ 4.7 (3,208 reviews) · Free to install

Sync your retail and B2B sales activity to QuickBooks
2

Xero

★ 4.2 (34 reviews) · Free to install

Sync daily sales to Xero for streamlined ecommerce accounting.
3

A2X Sync for QuickBooks & Xero

★ 5.0 (342 reviews) · Free trial available

Automated, accurate accounting in QuickBooks Online or Xero
4

Custlo ‑ Customer accounts app

★ 4.9 (83 reviews) · Free trial available

AI-powered customer accounts with Profile & Dashboard Features
Built for Shopify
5

QuickBooks Sync by MyWorks

★ 4.6 (53 reviews) · Free plan available

Automatically sync sales, inventory, POs, more with QuickBooks
Built for Shopify
6

Bookkeep Accounting+Inventory

★ 4.8 (54 reviews) · Free trial available

Automated accounting for QuickBooks, NetSuite or Sage Intacct.
7

Report Pundit: Custom Reports

★ 5.0 (1,887 reviews) · Free plan available

Create custom reports, combine data, and automate delivery
8

Customer Accounts Deluxe

★ 4.2 (35 reviews) · Free plan available

Grow retention & repeat sales with a modern customer portal
Built for Shopify
9

Hyve ‑ Post to Xero

★ 5.0 (44 reviews) · Free trial available

Automate bookkeeping of sales and accounting to Xero
Built for Shopify
10

Mipler ‑ Advanced Reports

★ 5.0 (598 reviews) · Free plan available

Build custom reports & analytics for sales, inventory & profit
Built for Shopify

Frequently asked questions

Which is the best Accounting app for Shopify?

Based on the Shopify App Store's own organic ranking for "accounting", QuickBooks Online currently holds the #1 spot, with a 4.7 star rating across 3,208 reviews. The best choice for your store still depends on your requirements, so compare the top results above.

How is this ranking determined?

We record the organic results merchants actually see when searching the Shopify App Store for "accounting", refreshed daily. Sponsored ("Ad") placements are excluded, so positions reflect Shopify's real search ranking rather than paid promotion. Source: the Shopify App Store search results for "accounting", you can verify the current ranking there yourself.

Which Accounting apps are Built for Shopify?

5 of the top 10 accounting apps hold the Built for Shopify badge: Custlo ‑ Customer accounts app, QuickBooks Sync by MyWorks, Customer Accounts Deluxe, Hyve ‑ Post to Xero, Mipler ‑ Advanced Reports.

What does the Built for Shopify badge mean?

Built for Shopify
Built for Shopify is the highest level of recognition Shopify awards an app. To earn the badge, an app must meet Shopify's standards for safety, performance, ease of use, and proven usefulness: it cannot slow down the admin, storefront, or checkout, must integrate seamlessly into the Shopify admin, and must demonstrate quality through installs, reviews, and ratings over time. When comparing similar apps, preferring ones with the badge is a safe default. Learn more about the Built for Shopify badge →

As of August 26, 2026, the top-ranked accounting app on the Shopify App Store is QuickBooks Online, with a 4.7 star rating across 3,208 reviews. 5 of the top 10 carry the Built for Shopify badge, and the average rating is 4.7 stars across 6,338 reviews.

Related keyword rankings

All Accounting rankings → · Browse all keywords →

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